Skills
Programming : C++, Javascript, Java, Python et R.
Databases : Postgresql, MySQL, Oracle et MS SQL Server.
Web : HTML5, javascript et CSS.
Machine learning : Neural Networks, Support Vector Machines, Random Forests, Inductive logic programming, evolutionary algorithms, clustering et probabilistic models. .
Combinatorial optimization : Linear programming, graph algorithms et optimisation multiobjectif.
Grid computing : OpenMPI, pthread et GPU.
High performance computing : SGE, Condor, OAR et OpenMOLE.
Bioinformatics : Sequence annotation (function, taxon et gene onthology), remote homology detection, metagenomics analysis, HiSeq et MiSeq analysis
Services
Galaxy Ansible Module Developer : ansible-galaxy, ansible-galaxy-extras , ansible-galaxy-os , ansible-galaxy-instance
Administrateur/Developpeur of Plant-and-diatom-genomics GitHub
Administrateur/Developpeur of Open Science Framework Ancient DNA and eDAF
Advisor of Mendeley
Responsabilites
Management of computing resources of the Plant and Algae Genomics laborator and the bioinformatics platform of IBENS Paris.
Creation, organization and administration of the GitLab dedicated to the Genomics of Plants and Algae.
Drafting of proposals for the allocation of computing resources.